BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data

2013454 citationsJournal Articlegold Open Access

Authors

Weilong Guo · Tsinghua University

Petko Fiziev · University of California, Los Angeles

Weihong Yan · University of California, Los Angeles

Shawn Cokus · University of California, Los Angeles

Xueguang Sun

Michael Q. Zhang · Center for Systems Biology

Pao‐Yang Chen · Institute of Plant and Microbial Biology, Academia Sinica

Abstract

Our evaluations on the performance show that BS-Seeker2 works efficiently and accurately for both WGBS data and RRBS data. BS-Seeker2 is freely available at http://pellegrini.mcdb.ucla.edu/BS_Seeker2/ and the Galaxy server.

Topics & Keywords

Epigenetics and DNA Methylation RNA modifications and cancer Cancer-related gene regulation

Publication Details

Published in: BMC Genomics

Volume 14, Issue 1, pp. 774-774

DOI: 10.1186/1471-2164-14-774

Field-Weighted Citation Impact: 9.74

Command Palette

BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data

Authors

Abstract

Topics & Keywords

Publication Details