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Understanding variation in tropical forest fungal populations and communities is important for assessing fungal biodiversity, as well as for understanding the regulatory roles fungi play in tropical forests. In wet tropical forests, the canopy is typically occupied by certain wood decomposers, endophytes, epiphylls, and pathogens. Aphyllophoraceous canopy fungi are a subset of species found in the understory. Marasmioid agarics in the understory often form extensive networks of rhizomorphs that trap litter; these and other aerial species are rare on the forest floor. Decomposers are stratified within the forest floor, with some species colonizing only fresh litter, others preferring decomposed litter, and others restricted to soil organic matter. Specificity to particular host substrates is frequent among tropical forest litter decomposers and contributes to spatial heterogeneity in fungal communities over the landscape. Litter basidiomycete and microfungal communities in patches of 1 m 2 or less do not significantly resemble communities in similar patches located at distances greater than 100 m. Disturbances induce changes in the environment and the abundance of different substrates, resulting in changes in fungal communities through time, and variation over the landscape. Severe disturbances, as well as the slight daily variations in rainfall, profoundly affect populations of fungal decomposers and their influence on plant nutrient availability. Key words: fungi, tropical forests, diversity, stratification, spatial variation, temporal variation.