Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees

201160 citationsJournal Articlegold Open Access

Authors

Fernando Izquierdo-Carrasco · Heidelberg Institute for Theoretical Studies

Stephen A. Smith · Heidelberg Institute for Theoretical Studies

Alexandros Stamatakis · Heidelberg Institute for Theoretical Studies

Abstract

We address three major issues pertaining to large scale tree reconstruction under maximum likelihood and propose respective solutions. Respective proof-of-concept/production-level implementations of our ideas are made available as open-source code.

Topics & Keywords

Genomics and Phylogenetic Studies Genetic diversity and population structure Gene expression and cancer classification

Publication Details

Published in: BMC Bioinformatics

Volume 12, Issue 1, pp. 470-470

DOI: 10.1186/1471-2105-12-470

Field-Weighted Citation Impact: 2.26

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Algorithms, data structures, and numerics for likelihood-based phylogenetic inference of huge trees

Authors

Abstract

Topics & Keywords

Publication Details