Automated analysis of phylogenetic clusters

2013368 citationsJournal Articlegold Open Access

Authors

Manon Ragonnet‐Cronin · University of Edinburgh

Emma B. Hodcroft · University of Edinburgh

Stéphane Hué · University College London

Esther Fearnhill · MRC Clinical Trials Unit at UCL

Valérie Delpech · Public Health England

Andrew Brown · University of Edinburgh

Samantha Lycett ·

Abstract

The Cluster Picker and Cluster Matcher can rapidly process phylogenetic trees containing tens of thousands of sequences. Together these tools will facilitate comparisons of pathogen transmission dynamics between studies and countries.

Topics & Keywords

Genomics and Phylogenetic Studies HIV Research and Treatment Gut microbiota and health

Publication Details

Published in: BMC Bioinformatics

Volume 14, Issue 1, pp. 317-317

DOI: 10.1186/1471-2105-14-317

Field-Weighted Citation Impact: 5.68

Command Palette

Automated analysis of phylogenetic clusters

Authors

Abstract

Topics & Keywords

Publication Details