Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat

201316 citationsJournal Articlegold Open Access

Authors

Tatiana Belova · Norwegian University of Life Sciences

Bujie Zhan · Norwegian University of Life Sciences

Jonathan Wright · Norwich University

Mario Cáccamo · Norwich University

Torben Asp · Aarhus University

Hana Šimková · Czech Academy of Sciences, Institute of Experimental Botany

Matthew Kent

Abstract

The effect of MP data integration into pair end shotgun assemblies of wheat chromosome was moderate; possibly due to poor contig assembly contiguity, the extreme repeat content of wheat, and the use of amplified chromosomal DNA for MP library construction.

Topics & Keywords

Plant Disease Resistance and Genetics Wheat and Barley Genetics and Pathology Chromosomal and Genetic Variations

Publication Details

Published in: BMC Genomics

Volume 14, Issue 1, pp. 222-222

DOI: 10.1186/1471-2164-14-222

Field-Weighted Citation Impact: 3.23

Command Palette

Integration of mate pair sequences to improve shotgun assemblies of flow-sorted chromosome arms of hexaploid wheat

Authors

Abstract

Topics & Keywords

Publication Details