BLAST-WarpX/warpx: 25.11

Dependencies AMReX: 25.11 pyAMReX: 25.11 PICSAR-QED: 25.06 pybind11: 3.0.1 picmistandard: 0.34.0 openPMD-api: 0.16.1 Python: 3.10 - 3.14 What's Changed Print maximum relative error when checksums fail by @EZoni in https://github.com/BLAST-WarpX/warpx/pull/6252 Dependencies: weekly update by @github-actions[bot] in https://github.com/BLAST-WarpX/warpx/pull/6248 Fix potential recursive calls of WarpX constructor. by @WeiqunZhang in https://github.com/BLAST-WarpX/warpx/pull/6223 Remove obsolete documentation about checksums by @EZoni in https://github.com/BLAST-WarpX/warpx/pull/6258 Add new paper using WarpX by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6256 bug fix. rtol ==> atol. by @JustinRayAngus in https://github.com/BLAST-WarpX/warpx/pull/6259 FieldGather.H : fix for uninitialized arrays by @grobertdautun in https://github.com/BLAST-WarpX/warpx/pull/6254 Make sure we geometrically grow the capacity of the particle buffers by @atmyers in https://github.com/BLAST-WarpX/warpx/pull/6260 SpectralFieldData: remove timer-based costs tracker from constructor by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6225 Dependencies: weekly update by @github-actions[bot] in https://github.com/BLAST-WarpX/warpx/pull/6261 Doc: Flux (Tuo@LLNL) by @ax3l in https://github.com/BLAST-WarpX/warpx/pull/6140 Update aurora.rst fixing a mistakenly pasted path from Perlmutter by @Noerr in https://github.com/BLAST-WarpX/warpx/pull/6241 Docs: update LXPLUS (CERN) documentation by @SeverinDiederichs in https://github.com/BLAST-WarpX/warpx/pull/6264 Tuo (LLNL): HDF5 Module Gone by @ax3l in https://github.com/BLAST-WarpX/warpx/pull/6255 Skip SortForDeposition if do_not_deposit by @roelof-groenewald in https://github.com/BLAST-WarpX/warpx/pull/6267 Docs: Simplify LXPLUS (CERN) setup by @SeverinDiederichs in https://github.com/BLAST-WarpX/warpx/pull/6268 Energy-preserving explicit PIC-MCC algorithm: electrostatic by @EZoni in https://github.com/BLAST-WarpX/warpx/pull/5955 Move InitBorrowing and ShrinkBorrowing from WarpX class to anonymous namespace in WarpXFaceExtensions.cpp by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6272 Deprecate photon species list by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6265 DSMC: implement generic two-product reaction by @oshapoval in https://github.com/BLAST-WarpX/warpx/pull/6250 Tuolumne (LLNL): CPU-Only, HDF5, PETSC, Signal Handling by @ax3l in https://github.com/BLAST-WarpX/warpx/pull/6270 Fix Leonardo CINECA docs link by @elehcim in https://github.com/BLAST-WarpX/warpx/pull/6277 VarianceAccumulationBuffer.cpp: remove unnecessary include by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6280 Dependencies: weekly update by @github-actions[bot] in https://github.com/BLAST-WarpX/warpx/pull/6278 Deprecation of photon species list: update documentation by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6281 Fix oneAPI CI errors by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6300 Rename skip_current variable for more clarity by @EZoni in https://github.com/BLAST-WarpX/warpx/pull/6303 WarpXParticleContainer_fwd.H: remove #include<AMReX_GpuAllocators.H> by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6299 WarpXParticleContainer_fwd.H: remove unused struct TmpIdx by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6297 WarpXParticleContainer class: remove unused PairIndex by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6296 PML: move some static functions MakeBoxArray, MakeBoxArray_single, and MakeBoxArray_multiple to anonymous namespace in PML.cpp by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6301 fix white space issue for add_warpx_test by @SeverinDiederichs in https://github.com/BLAST-WarpX/warpx/pull/6304 WarpXFaceExtensions: move some functions used only in the cpp file to anonymous namespace by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6309 Fix single precision issue in DSMC ionization by @roelof-groenewald in https://github.com/BLAST-WarpX/warpx/pull/6310 Dependencies: weekly update by @github-actions[bot] in https://github.com/BLAST-WarpX/warpx/pull/6307 Generalize DSMC two-product reactions for photons by @oshapoval in https://github.com/BLAST-WarpX/warpx/pull/6290 Replace WarpXUtilIO::WriteBinaryDataOnFile with a one-liner by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6289 WarpXParticleContainer : move DiagIdx from forward header to header by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6298 Python Control of OMP Threads by @ax3l in https://github.com/BLAST-WarpX/warpx/pull/6288 Add verbosity level for Checkpoint diagnostic output by @Noerr in https://github.com/BLAST-WarpX/warpx/pull/6312 Make PIdx struct more readable by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6294 MusclHancockUtils.H : fix uninitialized variables by @lucafedeli88 in https://github.com/BLAST-WarpX/warpx/pull/6295 Spacecraft Charging Example: Get Field Dir String by @ax3l in https://github.com/BLAST-WarpX/warpx/pull/6322 Remove particles.photon_species inputs left over by @EZoni in https://github.com/BLAST-WarpX/warpx/pull/6320 Add ablastr::math::set_random_seed by @ax3l in https://github.com/BLAST-WarpX/warpx/pull/6319 Remove latex source files for the documentation by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6323 Update runtime names to access particles from Python by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6318 Fix default tolerance in restart test by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6325 Implementing sparse matrix representation of Jacobian and using PETSc preconditioners by @debog in https://github.com/BLAST-WarpX/warpx/pull/6184 Fix restart with ionization and add automated test by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6291 Add ability to load particles from openPMD, through the PICMI interface by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6305 Dependencies: weekly update by @github-actions[bot] in https://github.com/BLAST-WarpX/warpx/pull/6330 Streamline contact page by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6328 Clean documentation: Move all bibliography to refs.bib by @RemiLehe in https://github.com/BLAST-WarpX/warpx/pull/6327 New Contributors @elehcim made their first contribution in https://github.com/BLAST-WarpX/warpx/pull/6277 Full Changelog: https://github.com/BLAST-WarpX/warpx/compare/25.10...25.11