nextstrain/nextclade_data: 2026-01-06--14-59-32Z

This release contains changes for datasets: SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs) SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins) SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86) SARS-CoV-2 (nextstrain/sars-cov-2/wuhan-hu-1/orfs) Include the 6 newly designated Nextstrain clades 25D (MC.10.2.1), 25E (PY.1), 25F (NW.1.2), 25G (XFC), 25H (XFJ), and 25I (BA.3.2). See https://github.com/nextstrain/ncov/pull/1192 for details. Add all 77 Pango lineages newly designated between 2025-12-05 and 2025-01-05. Unfold below to see a list of all newly included lineages with their designation dates: <details> <summary> Newly included lineages, with designation date in parentheses</summary> PQ.2.4.3 (2025-12-11) PQ.2.4.4 (2025-12-11) XFG.5.1.7 (2025-12-11) XGA.1 (2025-12-13) XGA.2 (2025-12-13) XGA.3 (2025-12-13) XGG (2025-12-13) QY.2 (2025-12-13) QY.3 (2025-12-13) XGH (2025-12-13) XFZ.2 (2025-12-13) XFC.3.3.1 (2025-12-13) XFC.3.3.2 (2025-12-13) XFC.3.4 (2025-12-13) XFC.3.5 (2025-12-13) XFV.4 (2025-12-13) XFV.6 (2025-12-13) XFV.5 (2025-12-13) XFG.10.5 (2025-12-13) XFG.14.1.4 (2025-12-13) XFG.14.1.5 (2025-12-13) XFG.14.8 (2025-12-13) QQ.2 (2025-12-13) QQ.3 (2025-12-13) PQ.4.6.2 (2025-12-13) RJ.1 (2025-12-13) PQ.4.7 (2025-12-13) PQ.4.8 (2025-12-13) PQ.4.9 (2025-12-13) RK.1 (2025-12-13) XFG.2.5.1 (2025-12-13) PQ.40 (2025-12-13) RL.1 (2025-12-19) XFG.14.1.6 (2025-12-19) XFG.14.1.7 (2025-12-19) XFG.14.1.8 (2025-12-19) XFG.14.9 (2025-12-19) RC.2.1 (2025-12-21) RC.3 (2025-12-21) RC.4 (2025-12-21) XFG.8.1.1 (2025-12-21) PQ.41 (2025-12-21) PQ.41.1 (2025-12-21) PQ.41.1.1 (2025-12-21) RM.1 (2025-12-21) RM.2 (2025-12-21) RN.1 (2025-12-21) RN.2 (2025-12-21) XFG.3.1.11 (2025-12-21) XFG.2.9 (2025-12-21) XFG.2.10 (2025-12-21) XFG.2.7.1 (2025-12-21) XFG.2.7.2 (2025-12-21) XFG.1.1.2 (2025-12-21) RP.1 (2025-12-21) RP.2 (2025-12-21) RN.2.1 (2025-12-21) XFG.37 (2025-12-21) XFG.38 (2025-12-21) PQ.2.5.3 (2025-12-21) PQ.2.5.4 (2025-12-21) RQ.1 (2025-12-21) RQ.2 (2025-12-21) PQ.2.5.5 (2025-12-21) XFG.2.11 (2025-12-21) PQ.42 (2025-12-21) PQ.2.11 (2025-12-21) PQ.2.11.1 (2025-12-21) PQ.13.3 (2025-12-21) PQ.13.3.1 (2025-12-21) XFG.39 (2025-12-21) XGJ (2025-12-22) XFG.2.12 (2025-12-22) XGK (2025-12-22) XFG.3.1.12 (2025-12-22) XGL (2025-12-22) XGM (2025-12-23) </details> SARS-CoV-2 (Mature proteins) (nextstrain/sars-cov-2/wuhan-hu-1/proteins) Include the 6 newly designated Nextstrain clades 25D (MC.10.2.1), 25E (PY.1), 25F (NW.1.2), 25G (XFC), 25H (XFJ), and 25I (BA.3.2). See https://github.com/nextstrain/ncov/pull/1192 for details. Add all 77 Pango lineages newly designated between 2025-12-05 and 2025-01-05. Unfold below to see a list of all newly included lineages with their designation dates: <details> <summary> Newly included lineages, with designation date in parentheses</summary> PQ.2.4.3 (2025-12-11) PQ.2.4.4 (2025-12-11) XFG.5.1.7 (2025-12-11) XGA.1 (2025-12-13) XGA.2 (2025-12-13) XGA.3 (2025-12-13) XGG (2025-12-13) QY.2 (2025-12-13) QY.3 (2025-12-13) XGH (2025-12-13) XFZ.2 (2025-12-13) XFC.3.3.1 (2025-12-13) XFC.3.3.2 (2025-12-13) XFC.3.4 (2025-12-13) XFC.3.5 (2025-12-13) XFV.4 (2025-12-13) XFV.6 (2025-12-13) XFV.5 (2025-12-13) XFG.10.5 (2025-12-13) XFG.14.1.4 (2025-12-13) XFG.14.1.5 (2025-12-13) XFG.14.8 (2025-12-13) QQ.2 (2025-12-13) QQ.3 (2025-12-13) PQ.4.6.2 (2025-12-13) RJ.1 (2025-12-13) PQ.4.7 (2025-12-13) PQ.4.8 (2025-12-13) PQ.4.9 (2025-12-13) RK.1 (2025-12-13) XFG.2.5.1 (2025-12-13) PQ.40 (2025-12-13) RL.1 (2025-12-19) XFG.14.1.6 (2025-12-19) XFG.14.1.7 (2025-12-19) XFG.14.1.8 (2025-12-19) XFG.14.9 (2025-12-19) RC.2.1 (2025-12-21) RC.3 (2025-12-21) RC.4 (2025-12-21) XFG.8.1.1 (2025-12-21) PQ.41 (2025-12-21) PQ.41.1 (2025-12-21) PQ.41.1.1 (2025-12-21) RM.1 (2025-12-21) RM.2 (2025-12-21) RN.1 (2025-12-21) RN.2 (2025-12-21) XFG.3.1.11 (2025-12-21) XFG.2.9 (2025-12-21) XFG.2.10 (2025-12-21) XFG.2.7.1 (2025-12-21) XFG.2.7.2 (2025-12-21) XFG.1.1.2 (2025-12-21) RP.1 (2025-12-21) RP.2 (2025-12-21) RN.2.1 (2025-12-21) XFG.37 (2025-12-21) XFG.38 (2025-12-21) PQ.2.5.3 (2025-12-21) PQ.2.5.4 (2025-12-21) RQ.1 (2025-12-21) RQ.2 (2025-12-21) PQ.2.5.5 (2025-12-21) XFG.2.11 (2025-12-21) PQ.42 (2025-12-21) PQ.2.11 (2025-12-21) PQ.2.11.1 (2025-12-21) PQ.13.3 (2025-12-21) PQ.13.3.1 (2025-12-21) XFG.39 (2025-12-21) XGJ (2025-12-22) XFG.2.12 (2025-12-22) XGK (2025-12-22) XFG.3.1.12 (2025-12-22) XGL (2025-12-22) XGM (2025-12-23) </details> SARS-CoV-2 (BA.2.86) (nextstrain/sars-cov-2/BA.2.86) Include the 6 newly designated Nextstrain clades 25D (MC.10.2.1), 25E (PY.1), 25F (NW.1.2), 25G (XFC), 25H (XFJ), and 25I (BA.3.2). See https://github.com/nextstrain/ncov/pull/1192 for details. Add all 77 Pango lineages newly designated between 2025-12-05 and 2025-01-05. Unfold below to see a list of all newly included lineages with their designation dates: <details> <summary> Newly included lineages, with designation date in parentheses</summary> PQ.2.4.3 (2025-12-11) PQ.2.4.4 (2025-12-11) XFG.5.1.7 (2025-12-11) XGA.1 (2025-12-13) XGA.2 (2025-12-13) XGA.3 (2025-12-13) XGG (2025-12-13) QY.2 (2025-12-13) QY.3 (2025-12-13) XGH (2025-12-13) XFZ.2 (2025-12-13) XFC.3.3.1 (2025-12-13) XFC.3.3.2 (2025-12-13) XFC.3.4 (2025-12-13) XFC.3.5 (2025-12-13) XFV.4 (2025-12-13) XFV.6 (2025-12-13) XFV.5 (2025-12-13) XFG.10.5 (2025-12-13) XFG.14.1.4 (2025-12-13) XFG.14.1.5 (2025-12-13) XFG.14.8 (2025-12-13) QQ.2 (2025-12-13) QQ.3 (2025-12-13) PQ.4.6.2 (2025-12-13) RJ.1 (2025-12-13) PQ.4.7 (2025-12-13) PQ.4.8 (2025-12-13) PQ.4.9 (2025-12-13) RK.1 (2025-12-13) XFG.2.5.1 (2025-12-13) PQ.40 (2025-12-13) RL.1 (2025-12-19) XFG.14.1.6 (2025-12-19) XFG.14.1.7 (2025-12-19) XFG.14.1.8 (2025-12-19) XFG.14.9 (2025-12-19) RC.2.1 (2025-12-21) RC.3 (2025-12-21) RC.4 (2025-12-21) XFG.8.1.1 (2025-12-21) PQ.41 (2025-12-21) PQ.41.1 (2025-12-21) PQ.41.1.1 (2025-12-21) RM.1 (2025-12-21) RM.2 (2025-12-21) RN.1 (2025-12-21) RN.2 (2025-12-21) XFG.3.1.11 (2025-12-21) XFG.2.9 (2025-12-21) XFG.2.10 (2025-12-21) XFG.2.7.1 (2025-12-21) XFG.2.7.2 (2025-12-21) XFG.1.1.2 (2025-12-21) RP.1 (2025-12-21) RP.2 (2025-12-21) RN.2.1 (2025-12-21) XFG.37 (2025-12-21) XFG.38 (2025-12-21) PQ.2.5.3 (2025-12-21) PQ.2.5.4 (2025-12-21) RQ.1 (2025-12-21) RQ.2 (2025-12-21) PQ.2.5.5 (2025-12-21) XFG.2.11 (2025-12-21) PQ.42 (2025-12-21) PQ.2.11 (2025-12-21) PQ.2.11.1 (2025-12-21) PQ.13.3 (2025-12-21) PQ.13.3.1 (2025-12-21) XFG.39 (2025-12-21) XGJ (2025-12-22) XFG.2.12 (2025-12-22) XGK (2025-12-22) XFG.3.1.12 (2025-12-22) XGL (2025-12-22) XGM (2025-12-23) </details>