nfdi4plants/nfdi4plants.knowledgebase: v1.0.0

This is the first release of the DataPLANT Knowledge Base – primarily to allow DOI creation and citation via zenodo. The Knowledge Base was grown and polished over with various contributions since mid 2022 as summarized below. What's Changed Polish README by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/3 polish tutorials by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/5 fix broken links due to sub-dir structuring... by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/6 Updated QuickStarts, moved to training section by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/9 add arc commander article by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/10 CWL notes and review ARC Quickstart by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/11 Minor update ARC QS and AC review by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/12 polished arcCommander after revision by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/13 Added Swate article and AC to sidebar by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/14 Update after revision, added Swate to sidebar by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/15 Update ArcCommander.md by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/17 markdown-to-pdf conversion by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/18 update intro by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/19 Minor updates by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/21 hide setup instructions by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/22 addition annotation patterns by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/26 change arcCommander, ArcCommander to ARC Commander by @CMR248 in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/24 Change around DataPLAN and Data Management Plan by @xiaoranzhou in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/28 Minor layout change by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/29 Update Annotation Principles and minor changes by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/31 update link by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/32 minor change by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/33 copied arc commander wiki contents ("as-is") by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/34 Few typos and links corrected in contribution guide. by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/36 change to "index" by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/35 access, arc export, update sidebar by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/37 Restructure sidebar by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/41 rename wiki page and add link to dev docs by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/38 Filled the official contribution guide, added its rendering to 'Home'… by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/42 update links by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/43 Fixed the place and links of the contribution file allowing to render it aand being placed at a place defined in the GitHub Docs. by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/45 update link by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/46 Updated some files of the AC manual & some minor changes by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/49 fix file by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/50 reduce index by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/54 changes to AC manual files by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/53 Corrected typos, changed knowledge base to Knowledge Base and git to … by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/55 Corrected .md to .html in a link in the Contribution Guide. by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/56 Changed the used example link in the contribution guide. by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/57 minor changes by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/58 add FAQ section by @CMR248 in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/59 Added answer to a question regarding the access token to the new FAQ … by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/60 split and restructure arc commander manual by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/61 updates to arc commander manual by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/66 fix macos installation by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/67 Add credential manager to QuickStart by @Martin-Kuhl in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/68 Corrected links in ARC Commander for QuickStart and Manual. Corrected… by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/70 Added two lines to the still hidden expert quickstart which we tested… by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/71 Update QuickStart_arcCommander_expert.md by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/76 Slide test by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/78 Update arc_installation_windows.md by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/74 Update arc_connect.md by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/75 Update QuickStart_swate.md by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/77 Solved #82 by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/83 Updated fornax. by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/84 Move Swate manual to Knowledge Base by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/89 add "TLDR" as "walk-through" to kb main page by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/90 Clean links by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/92 delete tests and unfinished docs by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/91 idea / suggestion: add hidden menu to knowledge base by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/93 re-add kb2pdf example to hidden menu by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/94 Added comment on a requirement (wget) and how to optionally install t… by @andreaschrader in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/97 small fix by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/95 fix dead link by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/100 hotfix: page not building by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/102 fix broken table by @CMR248 in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/105 Specify Swate Desktop installation alternatives by @omaus in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/103 Readme, Contribution and License by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/79 fix registration link by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/108 Add knowledge base article about ontologies by @Hannah-Doerpholz in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/106 unify-wording-createAnnoTable by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/109 adapt "before we start" by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/113 corrected typo in study content by @CMR248 in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/111 Update arc_installation_windows.md by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/117 Swate template creation by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/118 fix dead link by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/120 The teaching materials wedding by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/121 Marriage phase one by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/122 move teaching materials to own sidebar / menu by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/123 found a lonely > by @CMR248 in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/126 update web-components and add key styling by @Brilator in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/124 add faq section by @CMR248 in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/127 Update issue templates by @CMR248 in https://github.com/nfdi4plants/nfdi4plants.knowledgebase/pull/129 Ingest tm uni