CliMA/CalibrateEmulateSample.jl: v1.0.0

CalibrateEmulateSample v1.0.0 Diff since v0.7.0 Breaking changes New interfaces for Data Processing and dimension reduction. Gone are the flags for normalize/standardize etc. and now one passes in encoder_schedule and associate kwargs. See documentation for details. Merged pull requests: CES with spatially dependent forcing of L96 (#359) (@odunbar) CompatHelper: bump compat for MCMCChains to 7, (keep existing compat) (#361) (@github-actions[bot]) Utilities for new data processing pipeline (#363) (@odunbar) Replacement of Emulator processing with new encoding framework (#367) (@odunbar) Re-organize data reduction (#371) (@ArneBouillon) Store structure matrices and vectors with names as dictionaries (#373) (@ArneBouillon) Bump actions/checkout from 4 to 5 (#374) (@dependabot[bot]) Generalize Random feature defaults for greater stability (#375) (@odunbar) Bugfix for MCMC with encoding (#378) (@odunbar) Move CI to new file system (#381) (@nefrathenrici) Transfer of Observations to CES (particular focus on high-dimensional covariances) (#384) (@odunbar) Bump actions/checkout from 5 to 6 (#386) (@dependabot[bot]) Updating to compatability with new Turing Major versions (#388) (@odunbar) Bump actions/cache from 4 to 5 (#391) (@dependabot[bot]) Documentation for: BarkerSampling(), AGPJL() and ObservationSeries (#392) (@odunbar) Add default kernel bounds for GP (#393) (@odunbar) feat: add CLA workflow caller (#395) (@kalphonse-rgb) Bump styfle/cancel-workflow-action from 0.12.1 to 0.13.0 (#397) (@dependabot[bot]) chore: changes the CLA action trigger to pull_request_target (#398) (@cmbengue) Update Project.toml to v1 (#399) (@odunbar) Closed issues: Linux GH actions tests hangs for 15mins on one RF unit test. (#219) Logical inconsistency in the use of decorrelate in the Emulator construction? (#269) UndefRefError on write with JDL2 (#320) Add the utilites to perform rescaling, standardization and inverse-problem-aware dim reduction (#364) Migrate from old standardization/normalization framework to the data processing utilities in a seamless fashion (#365) Extend new data processing tools to handle the high-dimensional output covariance structures from EKP (#366) Investigate/improve changes in RF performance under new toolings (#368) Documentation of encoder/decoder API and refresh examples documentation (#369) A Concern about GaussianProcesses.jl (#377) Docs: Add the encoding schedule in the docs for example (#382) Add docs API and documentation in the use of Observations etc. from EKP (#385) Suddenly MCMC can't find step size "Failed to choose suitable stepsize in 20 iterations." -> Quick temporary Fix inside (#387) Default kernel bounds for GaussianProcess.jl (#390) Enable CLA Workflow (#394) Replication Issue: Lorenz '63/Lorenz '96 Benchmarks from Cleary et al. (2021) (#396)