layer-MAP (Modular Analysis Pipeline)

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Authors

Marco Barilari

Kenshu Koiso · Maastricht University

Paul A. Taylor · National Institutes of Health

Ömer Faruk Gülban

Daniel Glen

Peter Bandettini

olivier collignon · UCLouvain

Laurentius Huber · Martin University Hospital

Abstract

layer-MAP is a Bash/Matlab/Octave toolbox designed to perform automated high-resolution whole-brain layer segmentation in volume space with minimum manual editing for layer (f)MRI through wrapper functions that integrate commonly used MRI software packages. The toolbox provides examples of streamlined pipelines while remaining fully modular, allowing users to easily integrate custom code and adapt individual processing steps to the specific needs of their datasets and projects. If you used it please cite as: Barilari, M., Koiso, K., Taylor, P., Gulban, O. F., Glen, D., Bandettini, P., collignon, . olivier ., & Huber, L. (2026). layer-MAP (Modular Analysis Pipeline) (0.2.0). Zenodo. https://doi.org/10.5281/zenodo.18937199

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Published in: Zenodo (CERN European Organization for Nuclear Research)

DOI: 10.5281/zenodo.18937198

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layer-MAP (Modular Analysis Pipeline)

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Abstract

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