Estimates of habitat selection reveal distinct habitat associations across life-stages in three coral-reef damselfish

Abstract Understanding habitat association of animals and how they change through ontogeny is critical to predict the likely effects of habitat change on populations. We investigated how fine scale habitat associations of three common coral reef damselfish species changed among life-stages on reefs surrounding Lizard Island, northern Great Barrier Reef. All three species showed distinct habitat selection at settlement, however the degree to which these initial associations changed through ontogeny were species specific. Pomacentrus amboinensis associated with sandy areas throughout all life-stages; Pomacentrus chrysurus settled to areas with high cover of sand and rubble, but displayed no clear habitat preferences as juveniles or adults. Pomacentrus moluccensis settled to areas with high cover of fine branching corals before shifting to areas with relatively high cover of soft corals as adults. We also compared two different approaches to estimate habitat selection; one that quantified the benthic composition within the approximate home range of individuals versus a more widely used approach of recording a single point underneath the focal individual when they were first observed. Although results were broadly similar, the benthic composition approach revealed details that was overlooked using the single point method. Decreases in the availability of any of these preferred benthic habitats may adversely affect future populations, therefore understanding habitat associations and their transitions among life stages will be crucial in predicting future reef fish communities under ongoing coral loss and habitat change. This will require to systematically study a broader range of species, integrating relevant spatial and temporal scales.