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What's Changed doc: fix links to logo by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/51 doc: update fulcrum genomics logo with light/dark theme support by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/55 fix: use char_indices() to resolve clippy char_indices_as_byte_indices error by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/56 feat: add -N/--read-names-file option to filter reads by query name by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/54 feat: support protein sequences by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/36 fix: coloring off-by-one, panic-to-Result error handling, and Aho-Corasick optimization by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/57 feat: support searching IUPAC codes by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/27 test: add RC matching tests and property-based tests for matcher by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/58 feat: support outputting two FASTQs (R1/R2) for paired-end data by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/30 feat: preserve input order in parallel output by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/59 ci: add release-plz workflow for automated releases by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/60 fix: repair publish workflow and remove RC version by @nh13 in https://github.com/fulcrumgenomics/fqgrep/pull/62 Full Changelog: https://github.com/fulcrumgenomics/fqgrep/compare/v1.1.1...v1.1.2