Data from: Lake water depth and nutrient gradients mediate aquatic plant distribution via the strength of trait network associations

Abstract Aquatic macrophyte responses and adaptation to water depth and nutrient gradients are of critical importance for understanding the functional ecology of lakes and their restoration when degraded. However, the role of plant trait networks (PTNs), a powerful tool for decoding trait–environment–function relationships, in mediating these adaptations remains unclear, particularly across species and community scales. We conducted cross-scale PTN analyses at species and community levels for aquatic macrophytes, integrating assessments of phylogenetic signals and hierarchical environmental filtering. At species level, aquatic macrophytes exhibited two complementary PTN-based adaptive strategies: trait compartmentalization to enhance stress tolerance and trait integration to optimize resource utilization. Notably, local environmental conditions (rather than phylogenetic signals) dominated the pattern of PTN metrics, highlighting the primacy of immediate habitat constraints over evolutionary relatedness in driving species-specific adaptations. At community level, environmental filtering operated hierarchically, acting sequentially by water depth, nutrient availability, and lake morphology. PTNs further mediated the trade-off between community diversity and productivity, providing a mechanistic link between abiotic filtering and ecosystem function. Our findings advance network theory in functional ecology by extending its application to aquatic systems, bridging longstanding gaps between terrestrial and aquatic PTN research, and offering actionable guidance for eutrophic lake restoration (e.g., by targeting PTN-linked core traits related to nutrient adaptation). Overall, our work provides a cross-scale framework for understanding PTN mediated adaptation of aquatic macrophytes and its implications for ecosystem management.