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James J. Davis | Researchclopedia

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James J. Davis

Argonne National Laboratory ORCID

82

Works

16,121

Citations

33

h-index

45

i10-index

Research Topics

Genomics and Phylogenetic Studies SARS-CoV-2 and COVID-19 Research SARS-CoV-2 detection and testing

Affiliations

Argonne National Laboratory2013–2025

Historical Society of Western Pennsylvania1938–1938

University of Illinois Urbana-Champaign2009–2013

Amway (United States)2015–2015

University of Illinois Chicago2013–2013

Top Works

The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)

Ross Overbeek,Robert Olson,et al.

20134,567 citations

Antibiotic Resistance in Bacteria

Bacterial Identification and Susceptibility Testing

RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

Thomas Brettin,James J. Davis,et al.

20152,828 citations

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

Alice R. Wattam,James J. Davis,et al.

20161,674 citations

KBase: The United States Department of Energy Systems Biology Knowledgebase

Adam P. Arkin,Robert W. Cottingham,et al.

20181,600 citations

Introducing the Bacterial and Viral Bioinformatics Resource Center (BV-BRC): a resource combining PATRIC, IRD and ViPR

Robert Olson,Rida Assaf,et al.

20221,125 citations

The PATRIC Bioinformatics Resource Center: expanding data and analysis capabilities

James J. Davis,Alice R. Wattam,et al.

2019950 citations

Using Machine Learning To Predict Antimicrobial MICs and Associated Genomic Features for Nontyphoidal <i>Salmonella</i>

Marcus Nguyen,S. Wesley Long,et al.

2018278 citations

Multiple spillovers from humans and onward transmission of SARS-CoV-2 in white-tailed deer

Suresh V. Kuchipudi,Meera Surendran Nair,et al.

2022257 citations

PATtyFams: Protein Families for the Microbial Genomes in the PATRIC Database

James J. Davis,Svetlana Gerdes,et al.

2016255 citations