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Stephen Nayfach | Researchclopedia

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Stephen Nayfach

Bio-Medical Science (South Korea)ORCID

85

Works

11,159

Citations

34

h-index

47

i10-index

Research Topics

Genomics and Phylogenetic Studies Gut microbiota and health Microbial Community Ecology and Physiology

Affiliations

QB32014–2016

Gladstone Institutes2014–2019

United States Department of Energy2019–2019

Lawrence Berkeley National Laboratory2018–2025

University of California, San Francisco2014–2018

Top Works

CheckV assesses the quality and completeness of metagenome-assembled viral genomes

Stephen Nayfach,Antônio Pedro Camargo,et al.

20201,664 citations

Bacteriophages and microbial interactions

Plant Virus Research Studies

A unified catalog of 204,938 reference genomes from the human gut microbiome

Alexandre Almeida,Stephen Nayfach,et al.

20201,379 citations

A genomic catalog of Earth’s microbiomes

Stephen Nayfach,Simon Roux,et al.

2020951 citations

New insights from uncultivated genomes of the global human gut microbiome

Stephen Nayfach,Zhou Jason Shi,et al.

2019801 citations

Identification of mobile genetic elements with geNomad

Antônio Pedro Camargo,Simon Roux,et al.

2023751 citations

Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome

Stephen Nayfach,David Páez-Espino,et al.

2021617 citations

An integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography

Stephen Nayfach,Beltran Rodriguez-Mueller,et al.

2016522 citations

IMG/VR v4: an expanded database of uncultivated virus genomes within a framework of extensive functional, taxonomic, and ecological metadata

Antônio Pedro Camargo,Stephen Nayfach,et al.

2022427 citations

iPHoP: An integrated machine learning framework to maximize host prediction for metagenome-derived viruses of archaea and bacteria

Simon Roux,Antônio Pedro Camargo,et al.

2023417 citations